SAMResult<'id> (FSharp.Stats)

SAMResult<'id> Type

Namespace: FSharp.Stats.Testing
Assembly: FSharp.Stats.dll
Parent Module: SAM
Base Type: obj
All Interfaces: IEquatable<SAMResult<'id>> , IStructuralEquatable , IComparable<SAMResult<'id>> , IComparable , IStructuralComparable

SAM Result containing all information

Record fields

Record Field	Description
`AveragePermutations` Full Usage: `AveragePermutations` Field type: `SAM<'id>[]`	Array of the expected values using the average of permutations Field type: `SAM<'id>[]`
`Delta` Full Usage: `Delta` Field type: `float`	treshold, absolute difference between observed and expected statistics Field type: `float`
`FDR` Full Usage: `FDR` Field type: `float`	False Discovery Rate Field type: `float`
`LowerCut` Full Usage: `LowerCut` Field type: `float`	first Statistic where the difference of observed and expected is greater than delta Field type: `float`
`MedianFalsePositivesCount` Full Usage: `MedianFalsePositivesCount` Field type: `float`	Amount of "random" significant bioitems in the permutations (false positives) Field type: `float`
`NegSigBioitem` Full Usage: `NegSigBioitem` Field type: `SAM<'id>[]`	Array of all negatively regulated bioitems at given FDR Field type: `SAM<'id>[]`
`NonSigBioitem` Full Usage: `NonSigBioitem` Field type: `SAM<'id>[]`	Array of nonsignificant/unchanged bioitems at given FDR Field type: `SAM<'id>[]`
`Pi0` Full Usage: `Pi0` Field type: `float`	coefficient to avoid overestimation of FDR Field type: `float`
`PosSigBioitem` Full Usage: `PosSigBioitem` Field type: `SAM<'id>[]`	Array of all positively regulated bioitems at given FDR Field type: `SAM<'id>[]`
`S0` Full Usage: `S0` Field type: `float`	small positive constant for independent variance of statistic Field type: `float`
`SigCalledCount` Full Usage: `SigCalledCount` Field type: `int`	Amount of bioitems called significant (positive and negative) in the dataset at given FDR Field type: `int`
`UpperCut` Full Usage: `UpperCut` Field type: `float`	first Statistic where the difference of observed and expected is greater than delta Field type: `float`

Static members

Static member Description

Static member	Description
`SAMResult.Create(s0) (pi0) (delta) (uc) (lc) (psg) (nesg) (nosg) (perms) (fdr) (scg) (mfp)` Full Usage: `SAMResult.Create(s0) (pi0) (delta) (uc) (lc) (psg) (nesg) (nosg) (perms) (fdr) (scg) (mfp)` Parameters: s0 : `float` pi0 : `float` delta : `float` uc : `float` lc : `float` psg : `SAM<'a>[]` nesg : `SAM<'a>[]` nosg : `SAM<'a>[]` perms : `SAM<'a>[]` fdr : `float` scg : `int` mfp : `float` Returns: `SAMResult<'a>`	s0 : `float` pi0 : `float` delta : `float` uc : `float` lc : `float` psg : `SAM<'a>[]` nesg : `SAM<'a>[]` nosg : `SAM<'a>[]` perms : `SAM<'a>[]` fdr : `float` scg : `int` mfp : `float` Returns: `SAMResult<'a>`


                
                  
                    
                      SAMResult.Create(s0) (pi0) (delta) (uc) (lc) (psg) (nesg) (nosg) (perms) (fdr) (scg) (mfp)

Full Usage: SAMResult.Create(s0) (pi0) (delta) (uc) (lc) (psg) (nesg) (nosg) (perms) (fdr) (scg) (mfp)

Parameters:

s0 : float

pi0 : float

delta : float

uc : float

lc : float

psg : SAM<'a>[]

nesg : SAM<'a>[]

nosg : SAM<'a>[]

perms : SAM<'a>[]

fdr : float

scg : int

mfp : float

Returns: SAMResult<'a>

s0 : float
pi0 : float
delta : float
uc : float
lc : float
psg : SAM<'a>[]
nesg : SAM<'a>[]
nosg : SAM<'a>[]
perms : SAM<'a>[]
fdr : float
scg : int
mfp : float

Returns: SAMResult<'a>